CDS

Accession Number TCMCG010C13767
gbkey CDS
Protein Id XP_016566171.1
Location join(245824596..245824664,245827064..245827186,245828028..245828185,245830433..245830477,245831057..245831135,245831216..245831289,245831454..245831560,245832989..245833171,245833786..245833989,245834068..245834284,245834369..245834443,245834597..245834928,245835271..245835469,245835557..245835809,245835883..245836222,245836386..245836566,245836673..245836813,245836918..245837179,245837314..245837730,245838741..245839204,245840395..245840531,245840628..245840809,245840892..245841248,245841555..245841680,245841920..245841985,245842072..245843870,245843955..245844234,245844503..245844638,245845610..245845710)
Gene LOC107864335
GeneID 107864335
Organism Capsicum annuum

Protein

Length 2368aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319678
db_source XM_016710685.1
Definition PREDICTED: small subunit processome component 20 homolog isoform X2 [Capsicum annuum]

EGGNOG-MAPPER Annotation

COG_category V
Description Small subunit processome component 20 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCGACACATTCAGATGCATACGCAGTTAAATCTCTCAACAAATCTCCCGGTCGTCGCCGTTTCACTTTCGAGACATTTTCGGAGCGGATTGAGGATGTTGACATTGATGTGTACAGAAATCTTGACCCTTTAAAAGCTGAGCCCTCTGGAGGTTCCTCCTTCTTCCGGGATTGCCTTACGGAATGGAGAGAATTAAACACTGCTGAGGATTTTATTTCATTTTACGAGGAAATATTTCCCTTGGTACAGACGCTACCGCAAATTATACTGCAGAAGGAACTGATTGTCACAAAACTTCTTTCGAGATTGGACATGACAGGGAGATTATCCCTTGAGCCAATCCTCGGGTTGATTGCAGCCTTATCTAGAGATCTCCTGGAGGACTTCTTACCGTTTCTCCGGAGGATTGCTGACTCTTTGGAGTGTCTTCTCAAAAGTGGTGCTGATAGAGAACCAGTTATAATTGAGCAGATTTTCAAGTCATGGTCTTGTATTATGATGTACCTGCAAAAATATCTTGTTAAAGATGTTGTTGATGTTCTAAAGGTAACAGTACAATTAAGATATTATTCCAAGGAGTACGTCCATGAATTTATGGCTGACTCAGTATCATTCATATTGAGAAATGCTCCTGTTAAGCAGCTTATAAAAGGAGTGAGGAAGCTTATGTTTGAAGTTGCAAAGAAGCCATTGGAAATAAGAAAGTCTGCTGTCAGTTCACTATTGTGGTATGTTGTGAGAGGAAGCTCGTCCAGGTTACACTCAAGGGCTGAACAAGTGTTACGCCTACTGGTTGACAAGTCTCTGTTTGTTATAGGTGATCAGTTCACAGGGGGTGCTGAGGCCATTCTTCAAGTTCTTATTCTAACACTGCAGAGGTTATGTGAGGAATTGGAAGCTACTGAGTTGGAGTTGATGTGGGTTTGCTTATATGAGGAGATAACTGAGTGTGTATCTCACAGCCAGCTATTGCACCTTGGTCGCCTTTTGTCCCTTCTTGTTTCTACCCTGCAAGTTAGTTACATTCAAAAAATTTCTGATTACCAAGGGGTGCTTCAATTGATCCAGTTACTTGTACAGACTTACATTCTGCCTTATCCTAATGTGAAAGCGATTGATCAAACATCAAACATTATTGACAAAGTCATGCAGTCAATGCTTTGCATTCTTGACGGTCTATATAGAGCAAATAATATTTCCACTCTCTCTTCGGTTTCGATGCAATGGGCTCCTGTGTTTGAATTGAGGAATAAAAGTTTGCTGTCTTTTCTCGAAGATATTCTACTGAAGGACCCTTGCATTGTTCATTTCTTTAGAACTATCATTATAAGTGCATTAAATGATATGATAGAGATTTCAGAAGAAGAGGTTATACATTTGCTGCAGATCTTTTTTAAGAGGCTGCCAGTACCAGGACATAGCTTCTTGGATGAGGTTCCAAAAGAGAAGCTTTCAAGAATTCACATTTTTCTCCAAGAAGCCATTGGTCGCTGGATTCAGCGTATACAAAAGGAACCATATTCTACCCAAATTGAAGAAAATGACTTAGCCATACTGTGGGGAATCATAGGCTGCTATCCTTATATACTAGGTGGTTCAGTGAATGAGTCATTGCTAATGGACTTGGTTAATGCTCTAGATGAGCTTTTGAGTACTGAATCTGCTAACATTGCTGGGCATCCCAGAACTACCTGGCAGAGCTTGGTTGGTGCTGCATTGGGGTCTTATATCAAGTCACTGGACAATCAAAAATCAAGATGTGATGATTCTGTCGTAAGCAGGTTCTTAGATCTGGCAAGGAAGCACAAGACATGTTCTCAAGTGTTGTCTGCAGTAGCTGATCTCTTGGATTCAGTTTGTGGGTCCATAATCCAAGCTGATACAAGCGATAAAAAGCATCATCCAGAACTTGTAGTGAGTAAATTGGTGGATGCCTTAGGCGTGTTTGCTGCAAATTTGAGCCACCACGACAAGAAGTTGCGTCTTTCGACCTTGAGAATATTGTGCCACTACGAACCGTTGACTGAAGTCAGTTGTACTAATGAACAACCCCTTGAGAAGAAAATGAGATTGGATAATCCTCAGACTACTCTTGTGGACTACCATGCCAATAATGTGATTCATCTCCTACTTTTGATTGAAGAAACACCTCTTTCCATTGCAACCAGTAGAAAAGTCATCCTACTGATATCCAAAATACAGATGAGTTTATCTGCTGGAAGGGTAGCTGAAGAGTATATGCCTGTTGTTCTTAGTGGAATTATTGGGATCTTTCATAACCGTTTTAGCTATTTGTGGAACCCGACATTGGACTGCATAGCTGTCCTCCTCGGTCAATACTTTGGGCTGTTGTGGGATAGATATATTGAGTACCTTGGTCATTATCTGTCAGTTTTTCTGGGTTCTCATGATGAAGCTTCTCAAAGCAAGGGGGAATTGTTAGAGACAGCTAATAATTTGAATGGAAGCTTCAGGTCTTATGTCTCTCCAGGGTCTGATGGTGCGTCGTGTGCAACAATTTTTTCTTTATTGATTCAGTGCTTGCAGAGAATTCCTTCTGTTGCTGAATCACGTTCACGACAAATCATACCGCTGTTCTTGAAGTTCCTAGGCTATGATATTGAAGATGTTAAGAGTGTGGATTTATACAATCAGGAGCGTTGTAAGGGGAAAGAGTGGAAAAGCGTTCTTCAAGAATGGTTGTCCTTATTTAGACTGATGCGAAACCCTAGATCTTTTTATCTCAATCAATTCTTCAAGGAGGTTTTGATGTACAGACTTCTTGAGGAAGATGATGCTGACTTGCAAACTAAGGTCCTTGATTGCCTATTAAATTGGAAAGATGACTTCTTACTTCCGTATAATCAGCATCTAAAAAATCTGATCAATTCAAAAAGTTTGAGGGAGGAGCTCACGACATGGAGCTTATCTAGGGAATCAAATCTTGTTGATACAAGGCATAGAACCTTCCTTGTGCCTGTTGTTATCAGAGTACTGGCTCCTAAAGTCAGAAAGTTAAAGGCACTTGCTTCTCGTAAGCATGCAAGTGTCCATCATCGAAAGGCGATTCTTGGCTTCTTAGCGCAGCTAGATGTTGAAGAACTTCCTCTTTTCTTTGCCTTGCTGATAAAACCCCTTGTATCTGCTTCACAAGGTGCTGCAGCAAAGAGAGCGACTACACCTGAAACTCTAAAGCATGGGTTTGACTCATTTAGTGTCTTGGAGCATTTTTCCAGAGATTGCATCGACACCATTTCATGGAAGAAGAGATATGGTTTTCTACATGTAGTTGAGGATATTGTAGCTGTTTTTGATGAAGTGCACATTAGCCCTTTTCTTGATTTGTTAATGGGATGTATTGTACGCCTCTTGGACAGCTGTACATCAACTCTTGAAGGCACAAGAAATGATAGGGGGCTGGCCGATCATGGTCACCAAGTAGAGGATAAAATCATGACAAACATGGCTGCAAAGCAATGCAAGGATTTGAGATCTTTATGCCTGAAGATCATCTCTTTTATACTTAGCAAATACGAAGATCATGATTTCTGCCCTGAATTTTGGGATTTGTACTTTATGTCAGTAAAACCCTTAGTTGCTAATTTCAAACAGGAAGGCACTAGTAGCGAGAAGCCAAGCTCGTTATTTTCTTGTTTTCTGGCTATGAGTAGAAGTTCCAAACTTGTGCCTCTGCTGTCCCGAGAAAAGAATCTTGTACCTGATATATTTTCGATGCTAGCAGTCTCAACAGCATCGGATACCATCATTTCCTCGGTTCTCAAGTTTGTGGAGAATCTGTTGAATCTTGATGTTGAGCTGGGTAATGAAAACAACCTGCTTAGGAGATTACTGCTTCCTCACATTGATGTGCTAGTATGCAGTTTGCATAGTCTTTTTGTACATGATGGTGCACCTAAGAGGAAGATTGTCAATTATCCTGGGGAAAAAGAGCTCAGTGTTTTCAAGCTTTTATCAAAGCACATAAAGGGGCCGTTGGCTGCAAGAAAGTTTCTTGATATCTTGCTTCCGCTTCTGTCAAAGAGATCCAAAGACCCTGAGATTTGTGTAGGCACTTTACAGATTATCAAGGATATCGTAGAACCATTGGGTAGTGAAAGCAGTAAAAAGATAATCAAATCTATTTCTCCACTCGTAATTTCTGCTAGCTTGGATGCCCGCACCTCTATTTGTGATGTTCTTGATGCTGTCGCAGCTAATGATTCTTCTGTACATTCTACGGCAAAGCTTCTTCGTGATTTGAATGCCACGTCTACTGTAGAGTTGGGAGATCTCGATTATGATACCGTAATTGCTGCTTATGAAAGGATAGGTGCAGATTTTTTCCACACTGTCCCAGAAGAGCATGCATTGATTATTCTGTCACATGCTGTACATGATATGTCATCTGAGGATCTTATTTTGAGGCAGAGTGCATATAGATTGTTGCTTTCATTTGTCGAGTTTTCTAGTCAAATGCTTGATAGAGAGCTGAAATCTGAACATGGATCTCCTGGAGCCTGGGTTAGGCATATCCTAAGCAACTTCTTTTTGAAGCACATAGGTACTGCGATGAACAAAGAAGATTCAATCCAGAAGGTATGGATCGATCTACTTCGAGATATGGTCCTGAAGCTTCCAACAGTAGAAGACTTCAAATCATTTGCAGTTCTTTACAGTGCAGATCCAGAGCAGGACTTTTTCAACAATATTGTGCATTTGCAAAGACACAGGAGAGCGAGGGCTTTGTTACGCTTTAAGAATGTCATCAGTTCTGGAAATTTGTCTAAGGTTCTCATAAATAAAGTGTTTATCCCTCTTCTTTTCAAAATGTTGCTTGATGGTCAAATTGGAAAGGGTGAAAATATTAGAAGCGCATGTTTGGAAGCTGTTGGATCAATTTCTAAATTCTTGGAGTGGAGATCGTATTATGCATTACTCAATAGATGCTTTCGGGAGATGATACTGAAACCAGATAAACAAAAGGTGTTATTGAGGTTAATAAGCTCCATTTTGGACCAGTTCCATTTCTCAGAGACTCCTCCTGATAATGATACCGAGGATTCTATGCAAGATATTCAGAATACGTGTTTGATAGAGTCGGGCAAAGTCAGCGAACTTGCGGAAATAAAAATGTGCCTCCAAAAGGATGTGCTTCCCAGGGTACACAAAATGTTGACTGCTGATACGGATAATCTCAATGTAAACATCAGTCTAATTCTGCTCAAGTTGCTCAAGCTACTTCCTGGAGACATCATGGAATTGCACCTTCCATCTATAGTGCATCGCATCGCGAATTTCCTTAAGAATCGTTTGGAAAGTGTTCGTGATGAAGCTAGAGCTGCTTTGGCTGCTTGTTTAAAAGAACTAGGGCTGGAGTACTTGCAATTTGTTGTCAAAGTTTTGAAAGGCACTCTGAAGAGAGGATTTGAATTGCACGTTTTGGGATTCACTCTCAATTTTCTGCTGTCAAAATTTCTTCTTAATCCCAGTAGTGGGAAGTTGGATTATTGTTTAGAGGATCTTCTCTCAATTGCAGTAAATGATATACTTAGTGATGTTTCGGAGGAGAAAGAGGTTGAAAAGATTGCTTCAAAGATGAAAGAGACTAGGAAGCAAAAGTCATATGATACTCTCAAATTGATCGCCCAAAGCGTCACATTCAAAACACATGCTCTGAAGCTGCTTGCGCCAATTCTTAGTCATTTACAAAAGCAGCTGACTCCAAAAGTAAAAACAAAATTGGAGAATATGTTGTCTCATATAGCTGCTGGAATACAGTGTAATCCTTCTGTAAACCAGACGGAACTCTTTATCTTTGGATATGGTCTAATTAAAGATGGCATAAGAGATGAATCTCCTGGGCATGCAGAGTCATCGACTTTAATGGAAAGTAAGCAAAAGAAAGATGGAGTAAGCAGCCAGATTGATAAATCAGATAAGTTAGTCGGCATTGATCCACGATATTCCCATCTTATTACTGAATTTTCTCTTGGAGTGCTTCAAAATTACATGAAGAACATGAAATTTGACAAGAAAGATGAGCAGTTGTTGTCAATGCTAGATCCATTTGTAAGATTATTGAGTGAATGCTTGAACTCAAAATATGAGAATGTCATGTCTGCCTCGCTTAGGTGCTTATCTCCTGTGGTGAGGCTCCCTTTGCCATCACTTGAATCTCAGGCTGAGAAGATAAAGAATTCATTACTGAATATTGCTCAAGGTTCAGTAACTTCCAGTAATCCATTGTTGGAGTCTTGCGTTAAGTTGCTAACTGTGCTTTTGCGTAGCACTAAGATCACACTTTCTACGGATCAACTTCATATGCTAATCCAGTTTCCCCTTTTTGTTGATCTTGAAAGAAATCCTTCTTTTGTGGCTCTCTCACTGTTGAAAGCAATAGTGAGTAGGAAATTGGTAGTTGCAGAAATCTATGATATAGTTAAACGTGTTGCAGAGTTAATGGTGACTAGTCAAGTTGAATCAATTCGTAAGAAAAGCAGCCAAATTTTGCTGCAGTTTTTACTGGACTACCATATATCAGAGAAACGTCTACAACAGCATCTTGATTTCTTACTTTCAAACTTAAGATATGAGCATTCAACTGGAAGAGAAGCCATCCTTGAAATGCTCCATGCTATTATAATGAAATTTCCAGTTAGCATCATAGATGAACAATCTCAGATGTTTTTTCTTCATTTGGTGGTTTGTCTGGCGAATGACCGTGACAACAGAGTCCGCTCAATGACTGGTACAGTCATTAAGTTACTTGTTGGGCGAGTCAGCCCCCGTTCGCTCCAGTCAATTCTTGAGTTTAGTCGGTCCTGGTATCTGGGAGATAAACCACATTTATGGAGTGCCGCAGCACAGGTTTTGGGGTTACTCATTGAGGTACTTAAAGATGGTTTCCAAAAGTATATTGATAGCCTCTTGCCTGTTGTGAGAAACATCTTGCAATCTGCTGTTAATGTTCCTACAAATAAGCAAGTGGATCTACCCAATGATGGATCTGTGGGAAGCAATCTGCGAGTTGCTTTTGCATCCGCATCTGTGGTTGCGCAACATATCAAACCGTCTTGTAGCTTGCTACTTTGCCACTGTGACTGA
Protein:  
MATHSDAYAVKSLNKSPGRRRFTFETFSERIEDVDIDVYRNLDPLKAEPSGGSSFFRDCLTEWRELNTAEDFISFYEEIFPLVQTLPQIILQKELIVTKLLSRLDMTGRLSLEPILGLIAALSRDLLEDFLPFLRRIADSLECLLKSGADREPVIIEQIFKSWSCIMMYLQKYLVKDVVDVLKVTVQLRYYSKEYVHEFMADSVSFILRNAPVKQLIKGVRKLMFEVAKKPLEIRKSAVSSLLWYVVRGSSSRLHSRAEQVLRLLVDKSLFVIGDQFTGGAEAILQVLILTLQRLCEELEATELELMWVCLYEEITECVSHSQLLHLGRLLSLLVSTLQVSYIQKISDYQGVLQLIQLLVQTYILPYPNVKAIDQTSNIIDKVMQSMLCILDGLYRANNISTLSSVSMQWAPVFELRNKSLLSFLEDILLKDPCIVHFFRTIIISALNDMIEISEEEVIHLLQIFFKRLPVPGHSFLDEVPKEKLSRIHIFLQEAIGRWIQRIQKEPYSTQIEENDLAILWGIIGCYPYILGGSVNESLLMDLVNALDELLSTESANIAGHPRTTWQSLVGAALGSYIKSLDNQKSRCDDSVVSRFLDLARKHKTCSQVLSAVADLLDSVCGSIIQADTSDKKHHPELVVSKLVDALGVFAANLSHHDKKLRLSTLRILCHYEPLTEVSCTNEQPLEKKMRLDNPQTTLVDYHANNVIHLLLLIEETPLSIATSRKVILLISKIQMSLSAGRVAEEYMPVVLSGIIGIFHNRFSYLWNPTLDCIAVLLGQYFGLLWDRYIEYLGHYLSVFLGSHDEASQSKGELLETANNLNGSFRSYVSPGSDGASCATIFSLLIQCLQRIPSVAESRSRQIIPLFLKFLGYDIEDVKSVDLYNQERCKGKEWKSVLQEWLSLFRLMRNPRSFYLNQFFKEVLMYRLLEEDDADLQTKVLDCLLNWKDDFLLPYNQHLKNLINSKSLREELTTWSLSRESNLVDTRHRTFLVPVVIRVLAPKVRKLKALASRKHASVHHRKAILGFLAQLDVEELPLFFALLIKPLVSASQGAAAKRATTPETLKHGFDSFSVLEHFSRDCIDTISWKKRYGFLHVVEDIVAVFDEVHISPFLDLLMGCIVRLLDSCTSTLEGTRNDRGLADHGHQVEDKIMTNMAAKQCKDLRSLCLKIISFILSKYEDHDFCPEFWDLYFMSVKPLVANFKQEGTSSEKPSSLFSCFLAMSRSSKLVPLLSREKNLVPDIFSMLAVSTASDTIISSVLKFVENLLNLDVELGNENNLLRRLLLPHIDVLVCSLHSLFVHDGAPKRKIVNYPGEKELSVFKLLSKHIKGPLAARKFLDILLPLLSKRSKDPEICVGTLQIIKDIVEPLGSESSKKIIKSISPLVISASLDARTSICDVLDAVAANDSSVHSTAKLLRDLNATSTVELGDLDYDTVIAAYERIGADFFHTVPEEHALIILSHAVHDMSSEDLILRQSAYRLLLSFVEFSSQMLDRELKSEHGSPGAWVRHILSNFFLKHIGTAMNKEDSIQKVWIDLLRDMVLKLPTVEDFKSFAVLYSADPEQDFFNNIVHLQRHRRARALLRFKNVISSGNLSKVLINKVFIPLLFKMLLDGQIGKGENIRSACLEAVGSISKFLEWRSYYALLNRCFREMILKPDKQKVLLRLISSILDQFHFSETPPDNDTEDSMQDIQNTCLIESGKVSELAEIKMCLQKDVLPRVHKMLTADTDNLNVNISLILLKLLKLLPGDIMELHLPSIVHRIANFLKNRLESVRDEARAALAACLKELGLEYLQFVVKVLKGTLKRGFELHVLGFTLNFLLSKFLLNPSSGKLDYCLEDLLSIAVNDILSDVSEEKEVEKIASKMKETRKQKSYDTLKLIAQSVTFKTHALKLLAPILSHLQKQLTPKVKTKLENMLSHIAAGIQCNPSVNQTELFIFGYGLIKDGIRDESPGHAESSTLMESKQKKDGVSSQIDKSDKLVGIDPRYSHLITEFSLGVLQNYMKNMKFDKKDEQLLSMLDPFVRLLSECLNSKYENVMSASLRCLSPVVRLPLPSLESQAEKIKNSLLNIAQGSVTSSNPLLESCVKLLTVLLRSTKITLSTDQLHMLIQFPLFVDLERNPSFVALSLLKAIVSRKLVVAEIYDIVKRVAELMVTSQVESIRKKSSQILLQFLLDYHISEKRLQQHLDFLLSNLRYEHSTGREAILEMLHAIIMKFPVSIIDEQSQMFFLHLVVCLANDRDNRVRSMTGTVIKLLVGRVSPRSLQSILEFSRSWYLGDKPHLWSAAAQVLGLLIEVLKDGFQKYIDSLLPVVRNILQSAVNVPTNKQVDLPNDGSVGSNLRVAFASASVVAQHIKPSCSLLLCHCD